大豆功能基因组学学科组
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  学科组简介

  一、学科组简介 

  “大豆功能基因组学”学科组主要利用大豆全基因组信息,解析控制大豆调控产量、品质、养分高效利用和耐受逆境胁迫的分子模块;利用系统生物学的手段,通过计算机模拟和人工智能制定育种方案,并采取品种分子设计育种技术培育大豆新品种,为大豆育种技术的发展提供基础理论和技术手段。 

  学科组研究方向:大豆功能基因组学、大豆分子设计育种、大豆根系生物学,大豆表观遗传学 

  本学科组常年招生访问学者、博士后、研究生、联合培养研究生和科研助理,诚挚欢迎各界年轻俊才加入我们的团队。 

  二、队伍组成 

  组   长:冯献忠研究员 

  副组长:阎哲研究员 

  成   员:罗达特聘研究员、杨素欣研究员、冷建田工程师、于慧助理研究员、张耀华助理研究员、郑凯杰助理研究员 

  博士后:李新、高金珊 

  研究生:代爱华、唐宽强、冯星星、王泉、王东梅、马晶晶、周煌凯、李广、郭荫杰、吴涛、杨新晶、朱晓斌、陈笑、姜雨、叶永恒 

  科研助理:李梦婷、康天、周景龙、王秋实 

  三、在研项目 

序号 

项目类别 

项目名称 

负责人 

起止年限 

1 

国家重点研发计划项目 

主要经济作物的分子育种 

冯献忠 

2016-2020 

2 

国家自然科学基金面上项目 

大豆SKW基因的克隆和功能分析 

冯献忠 

2016-2019 

3 

中科院先导科技专项-任务 

大豆荚粒数等高产性状分子模块解析 

冯献忠 

2013-2018 

4 

国家外专局和中科院合作项目 

“大豆分子设计育种”创新国际团队 

冯献忠 

2016-2018 

5 

中科院135项目 重大突破 

东北主要农作物种质资源创新和新品种培育 

冯献忠 

2016-2020 

6 

国家重点研发计划项目-子课题 

大豆品质性状的分子设计 

杨素欣 

2016-2020 

7 

国家重点研发计划项目-任务 

增加籽粒数的分子调控机制 

杨素欣 

2016-2020 

8 

国家自然科学基金面上项目 

拟南芥RNA结合蛋白在胚乳发育中的功能和作用机理的研究 

杨素欣 

2015-2018 

9 

中国科学院人才项目项目 

大豆与根瘤菌共生固氮的分子机制研究 

阎哲 

2018-2023 

10 

国家重点研发计划项目-子课题 

大豆高产性状的分子设计 

冷建田 

2016-2020 

11 

国家重点研发计划项目-子课题 

大豆营养高效利用性状的分子设计 

于慧 

2016-2020 

12 

国家自然科学基金青年基金 

大豆铁代谢相关基因GmIMD的功能研究 

于慧 

2018-2021 

13 

国家重点研发计划项目-子课题 

大豆抗逆性状的分子设计 

张耀华 

2016-2020 

14 

博士后人才创新计划 

大豆花型分子设计育种与人工改良 

高金珊 

2017-2019 

15 

博士后面上基金项目 

调控大豆类胡萝卜素含量的GmICC 基因的克隆及功能分析 

高金珊 

2017-2019 

  四、科研成果 

  自2010年以来共发表论文50余篇,获得奖励3项,授权专利2项,另有3项专利处于实质审查阶段。 

  发表论文 

序号 

论文名称 

期刊名称 

作者 

1 

Identification of ZHOUPI orthologs in rice involved in endosperm development and cuticle formation. 

Frontiers in Plant Science 

Dou M,Zhang Y,Yang S*, Feng X* 

2 

GmILPA1, Encoding an APC8-like Protein, Controls Leaf Petiole Angle in Soybean 

Plant Physiology 

Gao J, Yang S*, Cheng W, Fu Y,Leng J, Yuan X, Jiang N, Ma J*,and Feng X* 

3 

Identification of ZOUPI Orthologs in 

Soybean Potentially Involved in Endosperm Breakdown and Embryogenic Development 

Frontiers in Plant Science 

Zhang Y, Li X,Yang S* and Feng X* 

4 

Overexpression of AmRosea1 Gene Confers Drought and Salt Tolerance in Rice 

international journal of molecular sciences 

Dou M, Fan S,Yang S, Huang R,Yu H,Feng X 

5 

Detecting a potion of structural variation of hedou12 by using some caracteristic of the next sequencing technology 

Artificial Intelligence: Techniques and Applications (AITA) 

Jia H, Wei H,Zhu D, Feng X,Liu F,Ma J,Wang R, Chang C and Li H 

6 

Mining structural variants of hedou12 using paired-end reads 

Bioinformatics and Biomedicine(BIBM) 

Jia H,Wei H,Dou M, Ma J,Yang H,Wang R, Feng X 

7 

Involvement of PACLOBUTRAZOL RESISTANCE6/KIDARI, an Atypical bHLH Transcription Factor, in Auxin Responses in Arabidopsis 

Front Plant Sci 

Zheng K, Wang Y, Zhang N, Jia Q, Wang X, Hou C, Chen JG, Wang S. 

8 

Arabidopsis KLU homologue GmCYP78A72 regulates seed size in soybean. 

Plant Mol Biol 

Zhao B, Dai A, Wei H, Yang S, Wang B,Jiang N, Feng X 

9 

Reduced function of the RNA-binding protein FPA rescues a T-DNA insertion mutant in the Arabidopsis ZHOUPI gene by promoting transcriptional read-through. 

Plant Mol Biol 

Zhang Y, Li X, Justin Goodrich, Wu C, Wei H, Yang S, Feng X 

10 

Characterization of dwarf mutants and molecular mapping of adwarf locus in soybean. 

Journal of Integrative Agriculture 

Cheng W, Gao J, Feng X, Shao Q, Yang S, Feng X 

11 

Direct evidence that suspensor cells have embryogenic potential that is suppressed by the embryo proper during normal embryogenesis 

PNAS 

Liu Y, Li X, Zhao J, Tang X, Tian S, Chen J, Shi C, Wang W, Zhang L, Feng X, Sun M 

12 

Kicking against the PRCs - A domesticated transposaseantagonisessilencing mediated by polycombgroup proteins and is an accessory component of polycombrepressive complex 2. 

PLoS Genet 

Shih Chieh Liang , Ben Hartwig , Pumi Perera, Santiago Mora-García, Erica de Leau, Harry Thornton, Flavia Lima de Alves, Juri Rapsilber, Suxin Yang, Geo Velikkakam James, Korbinian Schneeberger, E. Jean Finnegan, Franziska Turck , Justin Goodrich 

13 

Development of INDEL Markers for Genetic Mapping Based on Whole-Genome Re-sequencing in Soybean. 

G3 

Song X, Wei H, Cheng W, Yang S, Zhao Y, Li X, Luo D, Zhang H,Feng X 

14 

 Involvement of PACLOBUTRAZOL RESISTANCE6/KIDARI, an Atypical bHLH Transcription Factor, in Auxin Responses in Arabidopsis. 

Front Plant Sci 

Zheng K, Wang Y, Zhang N, Jia Q, Wang X, Hou C, Chen JG, Wang S 

15 

Characterization of DWARF14 Genes in Populus. 

Sci Rep 

Zheng K, Wang X, Weighill DA, Guo HB, Xie M, Yang Y, Yang J, Wang S, Jacobson DA, Guo H, Muchero W, Tuskan GA, Chen JG. 

16 

Ectopic expression of R3 MYB transcription factor gene OsTCL1 in Arabidopsis, but not rice, affects trichome and root hair formation. 

 Sci Rep 

Zheng K, Tian H, Hu Q, Guo H, Yang L, Cai L, Wang X, Liu B, Wang S. 

17 

Genetic evidence suggests that GIS functions downstream of TCL1 to regulate trichome formation in Arabidopsis. 

Bmc Plant Biology  

Zhang N, Yang L, Luo S, Wang X, Wang W, Cheng Y, Tian H, Zheng K, Cai L, Wang S. 

18 

A novel family of transcription factors conserved in angiosperms is required for ABA signalling.  

Plant Cell Environ  

Tian H, Chen S, Yang W, Wang T, Zheng K, Wang Y, Cheng Y, Zhang N, Liu S, Li D, Liu B, Wang S.  

19 

Overexpression of ERF96, a small ethylene response factor gene enhances salt tolerance in Arabidopsis.  

Biol Plantarum 

Wang X, Hou C, Zheng K, Li Q, Chen S, Wang S. 

20 

Characterization of an activation-tagged mutant uncovers a role of GLABRA2 in anthocyanin biosynthesis in Arabidopsis.  

Plant 

 Wang X, Wang X, Hu Q, Dai X, Tian H, Zheng K, Wang X, Mao T, Chen JG, Wang S. 

21 

An auxin responsive CLE gene regulates shoot apical meristem development in Arabidopsis.  

Front Plant Sci  

Guo H, Zhang W, Tian H, Zheng K, Dai X, Liu S, Hu Q, Wang X, Liu B, Wang S.  

22 

An ABA down-regulated bHLH transcription repressor gene, bHLH129 regulates root elongation and ABA response when overexpressed in Arabidopsis.  

Sci Rep 

Tian H, Guo H, Dai X, Cheng Y, Zheng K, Wang X, Wang S.  

23 

Control of trichome formation in Arabidopsis by poplar single-repeat R3 MYB transcription factors. 

Front Plant Sci  

Zhou L, Zheng K, Wang X, Tian H, Wang X, Wang S. 

24 

The CYCLOIDEA-RADIALIS module regulates petal shape and pigmentation, leading to bilateral corolla symmetry in Torenia fournieri (Linderniaceae). 

New Phytologist 

Su S, Xiao W, Guo W, Yao X,Xiao J,Ye Z,Wang N,Jiao K,Lei M,Peng Q,Hu X,Huang X, Luo D. 

25 

Transcriptional and Post-transcriptional Modulation of SQU and KEW Activities in the Control of Dorsal-Ventral Asymmetric Flower Development in Lotus japonicus. 

 Mol Plant 

Xu Z, Cheng K, Li X, Yang J, Xu S, Cao X, Hu X, Xie W, Yuan L, Ambrose M, Chen G, Mi H, Luo D.  

26 

The Small GTPase ROP10 of Medicago truncatula Is Required for Both Tip Growth of Root Hairs and Nod Factor-Induced Root Hair Deformation. 

Plant Cell 

Lei MJ, Wang Q, Li X, Chen A, Luo L, Xie Y, Li G, Luo D, Mysore KS, Wen J, Xie ZP, Staehelin C, Wang YZ. 

27 

The REL3-mediated TAS3 ta-siRNA pathway integrates auxin and ethylene signaling to regulate nodulation in Lotus japonicus. 

New Phytologist 

Li X, Lei M, Yan Z, Wang Q, Chen A, Sun J, Luo D, Wang Y. 

28 

 LATHYROIDES, Encoding a WUSCHEL-Related Homeobox1 Transcription Factor, Controls Organ Lateral Growth, and Regulates Tendril and Dorsal Petal Identities in Garden Pea (Pisum sativum L.). 

Mol Plant 

Zhuang LL, Ambrose M, Rameau C, Weng L, Yang J, Hu XH, Luo D, Li X. 

29 

The Pea TCP Transcription Factor PsBRC1 Acts Downstream of Strigolactones to Control Shoot Branching 

Plant Physiology 

Braun N, de Saint Germain A, Pillot JP, Boutet-Mercey S, Dalmais M, Antoniadi I, Li X, Maia-Grondard A, Le Signor C, Bouteiller N, Luo D, Bendahmane A, Turnbull C, Rameau C.  

30 

The REDUCED LEAFLET genes encode key components of the trans-acting small interfering RNA pathway and regulate compound leaf and flower development in Lotus japonicus. 

Plant Physiology 

Yan J, Cai X, Luo J, Sato S, Jiang Q, Yang J, Cao X, Hu X, Tabata S, Gresshoff PM, Luo D.  

31 

 Inoculation insensitive promoters for root cell type-specific gene expression in legume-rhizobium interactions. 

Plant Methods 

Gavrilovic S, Yan Z, Tsikou D, Jurkiewicz AM, Stougaard J, Markmann K.  

32 

Genetic diversity center of cultivated soybean (Glycine max) in China New insight and evidence for the diversity center of Chinese cultivated soybean. 

Journal of Integrative Agriculture 

Wang LX, Lin FY, Li LH, Li W, Yan Z, Luan WJ, Piao JH, Guan Y, Ning XC, Zhu L, Ma YS, Dong ZM, Zhang HY, Zhang YQ, Guan RX, Li YH, Liu ZX, Chang RZ,Qiu LJ.  

33 

Identification and functional characterization of soybean root hair microRNAs expressed in response to Bradyrhizobium japonicum infection.  

Plant Biotechnol 

Yan Z, Hossain MS, Valdés-López O, Hoang NT, Zhai J, Wang J, Libault M, Brechenmacher L, Findley S, Joshi T, Qiu L, Sherrier DJ, Ji T, Meyers BC, Xu D, Stacey G. 

34 

Identification of microRNAs and their mRNA targets during soybean nodule development: Functional analysis of the role of miR393-3p in soybean nodulation.  

New Phytologist 

Yan Z, Hossain MS, Valdés-López O, Zhai J, Wang J, Joshi T, Qiu L,  Meyers BC, Xu D, Stacey G. 

35 

An atlas of soybean small RNAs demonstrates regulation by phased siRNAs of hundreds of coding genes. 

Plant Cell 

Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdés-López O, Musket TA, Nguyen HT, Stacey G, Meyers BC. 

36 

A soybean Acyl Carrier Protein, GmACP, is important for root nodule symbiosis.  

Mol Plant Microbe Interact 

Wang J, Toth K, Tanaka K, Nguyen CT, Yan Z, Brechenmacher L, Dahmen J, Chen M, Thelen J, Qiu L, Stacey G.  

37 

miR172 regulates soybean nodulation. 

 Mol Plant Microbe Interact 

Yan,Z, Hossain MS, Wang J, Valdés-López O, Liang Y, Libault M, Qiu L, Stacey G. 

38 

MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. 

Genes Dev 

Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzlez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC. 

39 

Prediction of novel miRNAs and associated target genes in Glycine max. 

BMC Bioinformatics 

Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G.  

40 

Effects of Genotype by Environment Interaction on Agronomic Traits in Soybean. 

Crop Sci  

Yan Z, Lauer JG, Borges R, DeLeon N.  

  获奖情况 

序号 

成果名称 

级别 

类别 

第一完成人 

1 

植物器官形态变异的分子调控机制和遗传改良 

省部级 

吉林省自然科学奖一等奖 

冯献忠 

2 

中国侨界贡献奖 

省部级 

人才奖 

冯献忠 

3 

吉林省优秀归国人才学术贡献奖 

省部级 

人才奖 

冯献忠 

  授权专利 

序号 

专利名称 

专利号 

授权日期 

发明人 

1 

花青素合成调控基因Rosea1的应用 

ZL201410809101.3 

2018-03-09 

冯献忠,杨素欣,豆明珠,黄荣峰 

2 

调控种子大小的基因及其编码的蛋白质和应用 

ZL201110020709.4 

2012-05-23 

冯献忠,赵彦修,叶美,张慧,杨素欣 

3 

大豆种子大小调控基因GmBGS2、其编码蛋白及其应用 

201410802907.x 

实质审查 

冯献忠,杨素欣,赵宝添 

4 

一种植物胚乳特异启动子及其应用 

201410828290.9 

实质审查 

杨素欣,豆明珠,张耀华,冯献忠 

5 

控制大豆叶柄夹角大小的基因及其编码蛋白与应用 

201611130386.3 

实质审查 

冯献忠,杨素欣,高金珊 

 
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